lib module

sholl-2d function

#let sholl-2d(
  cell,
  radii: none,
  projection: "xy",
  center: none,
  center-node: none,
  domain: "neurites",
)

Documentation

Exact 2D circle/segment Sholl intersections after physical orthographic projection.

Parameters

cell (dictionary): The morphology to analyze.
radii (array): Positive Sholl radii in the morphology’s physical unit. Default: none.
projection (str, dictionary): Named or custom orthographic projection. Default: "xy".
center (none, array): Optional three-dimensional center coordinate. Default: none.
center-node (none, int): Optional node ID used as the center. Default: none.
domain (str): Node domain included in the intersection count. Default: "neurites".

Returns

dictionary

Defined in lib.typ:249.

Source

Module: lib
Defined in: lib.typ:249
Source: View source